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Membrane dynamics of ATG4B and LC3 in autophagosome formation
Yuanyuan Zhou1 , Zhenkun Wang1 , Yijia Huang1 , Chujie Bai2 , Xianli Zhang1 , Mengdie Fang3 , Zhenyu Ju1,* , Bo Liu1,*
1Key Laboratory of Regenerative Medicine of Ministry of Education, Guangzhou Regenerative Medicine and Health Guangdong Laboratory, Institute of Aging and Regenerative Medicine, Jinan University, Guangzhou 510632, China
2Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education/Beijing), Department of Bone and Soft Tissue Tumor, Peking University Cancer Hospital and Institute, Beijing 100142, China
3College of Bioengineering, Hangzhou Medical College, Hangzhou 310013, China
*Correspondence to:Zhenyu Ju , Email:zhenyuju@163.com Bo Liu , Email:ydqc_666@126.com
J Mol Cell Biol, Volume 13, Issue 12, December 2021, 853-863,  https://doi.org/10.1093/jmcb/mjab059
Keyword: autophagy, autophagosome biogenesis, ATG4, LC3, live-cell imaging, membrane binding kinetics

The biogenesis of autophagosomes provides the basis for macroautophagy to capture and degrade intracellular cargoes. Binding of the autophagy-related protein ATG8/LC3 to autophagic membranes is essential to autophagosome formation, which involves the specific and dynamic processing of ATG8/LC3 by cysteine protease ATG4. However, to date, the mechanism whereby ATG4 is recruited to the membranes, the interaction of ATG4 and ATG8/LC3 on the membranes, and its role in the growth of phagophore are not completely understood. Here, we used fluorescence recovery after photobleaching to monitor the turnover of GFP-tagged ATG4B and LC3B in living animal cells. The data show that ATG4B localizes to early autophagic membranes in an LC3B-dependent manner. During autophagy, ATG4B and LC3B undergo rapid cytosol/isolation membrane exchange but not at the cytosol/completed autophagosome. In addition, ATG4B activity controls the efficiency of autophagosome formation by impacting the membrane binding/dissociation of LC3B. These data suggest that ATG4 and LC3 play interdependent roles in the formation of autophagosomes.